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Revista de investigación clínica

versión On-line ISSN 2564-8896versión impresa ISSN 0034-8376

Rev. invest. clín. vol.76 no.4 Ciudad de México jul./ago. 2024  Epub 10-Sep-2024

https://doi.org/10.24875/ric.24000159 

Letters to editor

Genotypes Distribution of the SNP rs1477196 of FTO gen Associated with Primary Knee Osteoarthritis in Females: An Analysis using the 100Genomes Database

Ángel Roco-Videla1  * 

Sergio V. Flores2 

Mariela Olguin-Barraza3 

1Faculty of Engineering, Universidad Católica de la Santísima Concepción, Concepción, Chile;

2Universidad Arturo Prat, Iquique, Chile;

3Programa de Magister en Ciencias Químico-Bilógicas, Facultad de Ciencias de la Salud, Universidad Bernardo O'Higgins, Santiago, Chile


Dear Editor,

In the study by Arellano-Pérez-Vertti et al.1, when stratified by sex, the codominant genetic model 1 AA/GG and the dominant model AA/AG + GG were found to have a significant association with primary knee osteoarthritis in women, even after adjusting for other covariates. Therefore, haplotype AA would be associated with primary knee osteoarthritis in women.

If we download the information regarding the rs1477196 polymorphism from the 1000 genomes2 database (www.internationalgenome.org), we can obtain information about 1271 women, grouped into five macro-populations (26 populations). When analyzing the distribution of genotypes, statistically significant differences were found between macro-populations (p = 0.0001) (Fig. 1A). The American macro-population presents the highest percentage of the AA risk genotype (Fig. 1B), with significant differences between the populations that make it up (p = 0.0001). In the Peruvian population, 43.3% present the AA genotype, being twice as many as Colombians and 5 times as many as in Puerto Ricans. This high variability in genotypic distribution may be due to ethnic factors, given the different migratory flows that have existed over the years3. The development of interpopulation studies in Latin America could provide information that allows the relationship between ethnicity, gender and primary knee osteoarthritis as research that has given indications of polymorphisms, an increased risk of obesity in women4 or early development of Parkinson´s according to ethnicity5. Thus, the research developed by Arellano-Pérez-Vertti et al.1 is a valuable starting point for new studies.

Figure 1 A: distribution of rs1477196 genotypes in five macro-populations. B: distribution of the genotypes of rs1477196 in the American population. 

REFERENCES

1. Arellano-Pérez-Vertti RD, González-Galarza FF, Prone-Olazábal D, Arellano-Ramírez DO, Arellano-Ramírez DF, Arguóello-Beltrán CS, et al. The rs1477196 SNP of the FTO gene is associated with primary knee osteoarthritis in a female population from Northern Mexico. Rev Invest Clin. 2024;76:37-44. [ Links ]

2. Auton A, Abecasis GR, Altshuler DM, Durbin RM, Abecasis GR, Bentley DR, et al. A global reference for human genetic variation. Nature. 2015;526:68-74. [ Links ]

3. Roco-Videla Á, Caviedes-Olmos M, Maureira-Carsalade N, Olguín-Barraza M. rs266729 polymorphism of the ADIPOQ gene. What role does genetic ancestry play in the distribution of its alleles? Nutr Hos 2023;40:232-3. [ Links ]

4. Rampersaud E, Mitchell BD, Pollin TI, Fu M, Shen H, O´Connell JR, et al. Physical activity and the association of common FTO gene variants with body mass index and obesity. Arch Intern Med. 2008;168:1791. [ Links ]

5. Riboldi GM, Frattini E, Monfrini E, Frucht SJ, Di Fonzo A. A practical approach to early-onset parkinsonism. J Parkinsons Dis. 2022;12:1-26. [ Links ]

Received: July 19, 2024; Accepted: August 05, 2024

* Corresponding author: Angel Roco-Videla. E-mail: aroco@ucsc.cl

Creative Commons License Revista de Investigación Clínica. Published by Permanyer. This is an open ccess article under the CC BY-NC-ND license